lalinference_pipe Namespace Reference

Functions
def	mkdirs (path)
	Helper function. More...
def	add_variations (cp, section, option, values=None, allowed_values=None)
	Push some possible variations onto the stack. More...
def	check_priors_are_compatible (cp)
	Check that the priors are compatible with the fixed parameters. More...
def	generate_variations (master_cp, variations)
	Generate config parser objects for each of the variations. More...
def	setup_roq (cp)
	Generates cp objects with the different ROQs applied. More...

Variables
string	usage
	parser = OptionParser(usage)
	default
	None
	action
	type
	help
	metavar
	False
	opts
	args
dictionary	variations = {}
	inifile = args[0]
	cp = configparser.SafeConfigParser()
	fp = open(inifile)
	optionxform
	daglogdir = cp.get('paths','daglogdir')
string	approx = 'approx'
list	roq_paths = []
	outerdaglog = os.path.join(daglogdir,'lalinference_multi_'+str(uuid.uuid1())+'.log')
	outerdag = pipeline.CondorDAG(outerdaglog)
	master_cp = cp
	basepath = cp.get('paths','basedir')
	injpath = cp.get('input','injection-file')
	myinjpath = os.path.join(basepath,os.path.basename(injpath))
	dag = pipe_utils.LALInferencePipelineDAG(this_cp)
	dagjob
	dagnode = pipeline.CondorDAGManNode(dagjob)
	x = subprocess.Popen(['condor_submit_dag','-dont_suppress_notification',outerdag.get_dag_file()])

Function Documentation

mkdirs()

def lalinference_pipe.mkdirs

(

path

)

Helper function.

Make the given directory, creating intermediate dirs if necessary, and don't complain about it already existing.

Definition at line 56 of file lalinference_pipe.py.

add_variations()

def lalinference_pipe.add_variations	(		cp,
			section,
			option,
			values = None,
			allowed_values = None
	)

Push some possible variations onto the stack.

If only one value is specified then just store it in cp as usual cp : ConfigParser object to look in section : [section] in cp option : option in section values: If given, use instead of cp's allowed_values : if given, anything else will trigger an error

Definition at line 69 of file lalinference_pipe.py.

check_priors_are_compatible()

def lalinference_pipe.check_priors_are_compatible

(

cp

)

Check that the priors are compatible with the fixed parameters.

Parameters

cp: configparser.ConfigParser an opened config parser object

Definition at line 113 of file lalinference_pipe.py.

generate_variations()

def lalinference_pipe.generate_variations	(		master_cp,
			variations
	)

Generate config parser objects for each of the variations.

Definition at line 168 of file lalinference_pipe.py.

setup_roq()

def lalinference_pipe.setup_roq

(

cp

)

Generates cp objects with the different ROQs applied.

Definition at line 286 of file lalinference_pipe.py.

Variable Documentation

usage

string lalinference_pipe.usage

(

void

)

Initial value:

= """ %prog [options] config.ini
Setup a Condor DAG file to run the LALInference pipeline based on
the config.ini file.
 
The user can specify either an injection file to analyse, with the --inj option,
a list of SnglInspiralTable or CoincInspiralTable triggers with the --<x>-triggers options,
a GraceDB ID with the --gid option,
or an ASCII list of GPS times with the --gps-time-file option.
 
If none of the above options are given, the pipeline will analyse the entire
stretch of time between gps-start-time and gps-end-time, specified in the config.ini file.
 
The user must also specify and ini file which will contain the main analysis config.
 
"""

Definition at line 16 of file lalinference_pipe.py.

parser

lalinference_pipe.parser = OptionParser(usage)

Definition at line 31 of file lalinference_pipe.py.

default

lalinference_pipe.default

Definition at line 32 of file lalinference_pipe.py.

None

lalinference_pipe.None

Definition at line 32 of file lalinference_pipe.py.

action

lalinference_pipe.action

Definition at line 32 of file lalinference_pipe.py.

type

lalinference_pipe.type

Definition at line 32 of file lalinference_pipe.py.

help

lalinference_pipe.help

Definition at line 32 of file lalinference_pipe.py.

metavar

lalinference_pipe.metavar

Definition at line 32 of file lalinference_pipe.py.

False

lalinference_pipe.False

Definition at line 42 of file lalinference_pipe.py.

opts

lalinference_pipe.opts

Definition at line 44 of file lalinference_pipe.py.

args

lalinference_pipe.args

Definition at line 44 of file lalinference_pipe.py.

variations

dictionary lalinference_pipe.variations = {}

Definition at line 50 of file lalinference_pipe.py.

inifile

lalinference_pipe.inifile = args[0]

Definition at line 212 of file lalinference_pipe.py.

cp

lalinference_pipe.cp = configparser.SafeConfigParser()

Definition at line 214 of file lalinference_pipe.py.

fp

lalinference_pipe.fp = open(inifile)

Definition at line 215 of file lalinference_pipe.py.

optionxform

lalinference_pipe.optionxform

Definition at line 216 of file lalinference_pipe.py.

daglogdir

lalinference_pipe.daglogdir = cp.get('paths','daglogdir')

Definition at line 235 of file lalinference_pipe.py.

approx

string lalinference_pipe.approx = 'approx'

Definition at line 268 of file lalinference_pipe.py.

roq_paths

list lalinference_pipe.roq_paths = []

Definition at line 282 of file lalinference_pipe.py.

outerdaglog

lalinference_pipe.outerdaglog = os.path.join(daglogdir,'lalinference_multi_'+str(uuid.uuid1())+'.log')

Definition at line 446 of file lalinference_pipe.py.

outerdag

lalinference_pipe.outerdag = pipeline.CondorDAG(outerdaglog)

Definition at line 447 of file lalinference_pipe.py.

master_cp

lalinference_pipe.master_cp = cp

Definition at line 451 of file lalinference_pipe.py.

basepath

lalinference_pipe.basepath = cp.get('paths','basedir')

Definition at line 454 of file lalinference_pipe.py.

injpath

lalinference_pipe.injpath = cp.get('input','injection-file')

Definition at line 457 of file lalinference_pipe.py.

myinjpath

lalinference_pipe.myinjpath = os.path.join(basepath,os.path.basename(injpath))

Definition at line 458 of file lalinference_pipe.py.

dag

lalinference_pipe.dag = pipe_utils.LALInferencePipelineDAG(this_cp)

Definition at line 484 of file lalinference_pipe.py.

dagjob

lalinference_pipe.dagjob

Initial value:

= pipeline.CondorDAGManJob(os.path.join(this_cp.get('paths','basedir'),dag.get_dag_file()),
                                    this_cp.get('paths','basedir'))

Definition at line 485 of file lalinference_pipe.py.

dagnode

lalinference_pipe.dagnode = pipeline.CondorDAGManNode(dagjob)

Definition at line 487 of file lalinference_pipe.py.

x

lalinference_pipe.x = subprocess.Popen(['condor_submit_dag','-dont_suppress_notification',outerdag.get_dag_file()])

Definition at line 503 of file lalinference_pipe.py.